Heatmap: Cluster_61 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
0.95 -1.66 1.91 2.29 1.89 2.11 2.45 0.72 0.47 -1.65 -1.15 0.53 -0.35 -3.48 -1.49 -5.41 -6.18 -7.61 -0.49 -2.73 -1.85 -8.05 -7.81 0.11 -1.21 -1.25 -2.75 -2.51 3.31 -0.56 -1.02 -1.28 -4.16 -3.35 -7.83 -6.87 0.24 -0.47 -3.86 -8.68 - - -6.79 -5.88 -7.79 - - -6.94
0.34 0.11 -2.8 -1.13 -2.83 -1.76 -0.64 -1.61 -2.03 -3.05 -2.54 1.45 -2.77 -0.66 -0.56 -0.45 0.0 -0.14 0.01 0.06 -1.11 -1.41 -1.38 1.3 -3.26 0.97 -2.48 1.96 3.9 -3.12 1.03 -1.74 -1.39 -1.47 -1.24 -0.54 -0.83 0.03 -1.69 -5.49 -6.19 1.1 -1.53 -5.5 -0.67 -4.48 - -4.92
-5.58 -4.47 - - -7.55 -6.89 -7.42 - -7.79 - - - - -0.6 1.49 -2.7 -7.66 -5.54 3.12 -5.92 -7.82 -5.52 -7.39 0.11 -6.79 -0.47 -3.96 -0.88 4.74 -9.21 -4.35 -2.31 -2.09 -3.21 -0.54 -0.68 0.87 -0.99 -2.69 - - 0.06 -5.05 - -0.05 - - -7.58
1.13 -4.9 3.29 3.51 2.72 1.04 3.42 -4.73 -3.73 -4.79 -4.06 -8.33 - -6.43 -5.05 -7.08 - - -1.01 -5.67 - -7.66 - -2.51 - -3.07 -7.59 -5.27 1.96 -9.57 -4.24 -5.43 -7.81 -9.78 -11.39 - - -2.79 -11.49 - - - -7.65 -6.04 -7.62 - - -6.42
-3.27 -6.0 2.0 3.88 2.75 - 3.51 - - -5.29 - - - - - - - - 1.79 -4.74 - - - -0.7 - -0.79 - -3.59 2.15 - - - -5.54 - -6.08 0.76 - -3.79 - - - - - - - - - -
0.85 -2.56 2.91 2.97 2.75 1.87 3.01 0.1 -1.31 -2.5 -2.77 -6.0 -0.71 -3.15 -2.0 - -5.02 -6.2 -0.75 -4.56 -6.24 - -5.9 -1.48 -4.65 -1.93 -3.88 -4.76 2.81 -3.43 -3.73 -2.76 -6.98 -2.8 -4.62 -5.88 -6.05 -3.67 -6.76 - - -3.88 -3.82 -3.21 -5.79 - -4.51 -5.42
1.45 -3.52 2.93 3.39 2.93 1.42 3.16 -5.68 -4.77 -3.39 -2.97 -4.9 -2.7 -4.43 -4.36 -4.9 -5.63 -5.89 0.24 -3.9 -0.97 -3.73 -4.41 -2.39 -5.7 -5.53 -5.31 - 1.77 - -2.84 -0.52 -4.51 -3.57 -9.87 - - -3.61 -4.64 -4.24 -3.01 -2.44 -3.36 -3.18 - - - -
-0.15 -5.41 1.48 4.53 0.66 -2.54 3.75 - -1.9 - -3.2 - - - - - - - -1.64 - - - - - - - - - 2.4 - - - - - - - - -8.05 -6.91 - - - - - - - - -
AT1G57800 (VIM5)
-9.42 -5.74 0.66 -1.6 -0.62 -2.98 -2.66 -3.66 -4.29 -3.89 -4.93 1.94 -2.59 -3.78 -5.68 -8.33 - - -2.94 -7.54 -7.68 -7.77 -8.34 0.03 -3.43 -0.85 -7.46 -2.11 5.04 -3.25 -1.62 -1.63 -6.29 -4.94 -5.95 -8.32 -8.5 2.32 -10.61 - - - -8.24 -6.66 -8.25 - -6.37 -
-3.15 -5.95 3.15 3.65 2.48 0.75 3.63 -4.65 -3.72 -5.25 -3.37 -6.1 - -6.71 - -7.2 - - 0.29 -7.95 - - - -2.93 - -4.14 - -6.1 2.32 -8.04 -3.64 - - - - - - -3.63 - - - - - - - - - -
0.68 0.33 - -6.28 - - -6.24 - - - -5.97 - -6.29 0.7 -3.04 -6.93 - - - -2.06 -5.33 - - 2.81 - 0.77 -8.04 -0.27 4.96 -8.12 1.16 -8.33 -7.94 -9.03 -6.48 -7.92 -6.94 -7.42 - - - - - -7.24 -4.5 - - -7.42
-7.2 -5.28 -2.04 0.86 -0.67 -2.65 1.51 - -7.31 -6.74 -4.7 - - -2.72 -5.91 - -6.12 -3.82 -8.59 -5.11 -6.11 -4.25 -2.63 -0.51 2.23 -2.04 -5.35 -0.84 4.89 -0.37 -1.82 -2.53 -6.12 -3.87 -0.6 -0.42 - 1.62 -9.2 - - -5.98 -6.89 - - - - -
- -4.53 - - - - - - - - - - - 0.27 -2.71 -2.66 -4.86 -3.1 0.23 -7.26 - - - 1.37 -2.84 0.65 0.3 0.42 4.74 -4.95 -5.7 -0.9 -1.55 -0.59 -2.17 1.85 -0.7 0.06 -3.52 - - 1.77 -0.45 -4.11 -2.37 - - -
-3.17 -2.78 2.49 3.55 1.93 0.45 3.83 -2.02 -0.37 -3.48 -0.45 -1.74 -3.27 - - - - - 0.98 -3.57 - - - -4.83 - -3.36 -2.46 -3.47 2.2 -3.06 -3.66 - - - -5.17 - -1.68 -7.05 -6.36 0.15 - - - -2.91 - - - -
-2.9 -5.66 - 4.41 - - 4.2 - - - - - - -2.69 -0.88 - -0.97 - - -2.21 - - - -4.44 - -3.95 - -0.63 1.98 - -3.27 -0.42 - - -3.32 - -2.01 -1.42 -2.81 - -1.25 - - - - - - -
AT2G14365 (LCR84)
- -7.16 -4.0 -1.21 - - -1.01 - -7.21 - -6.89 - - -3.22 - -6.27 - - -4.76 -8.19 -7.2 - - 2.71 -6.18 1.59 - -1.72 5.18 - -0.46 -7.45 - - -9.35 - - - - - - - - - -6.76 - - -
-6.51 -2.9 1.71 3.55 1.71 1.83 3.65 -0.24 0.87 -3.7 -1.19 -1.3 -2.52 -7.7 -3.58 -5.3 - - -0.54 -4.53 - - - -0.42 - -1.09 -4.53 -4.12 2.8 -5.72 -4.15 -5.25 -4.76 -4.82 -6.58 - -3.72 -2.27 -7.14 -3.84 - - - - -3.56 - - -
-0.23 -1.24 -3.08 -0.57 0.52 1.24 0.72 -4.02 -3.57 -6.04 -4.42 -4.16 -4.78 -0.29 -2.12 -4.35 -4.23 -0.67 -0.38 -2.76 -5.27 -4.18 -4.26 1.69 -2.08 0.26 1.35 1.41 4.54 -4.72 -0.3 -2.9 -5.2 -3.62 -2.43 -3.45 -0.49 1.0 -5.21 -7.69 - -5.73 -7.57 - -6.08 - -6.67 -5.38
- -5.6 -4.26 4.02 -3.15 - 4.33 - 1.07 - -1.19 - - - - - - - - - - -4.35 -12.06 -9.38 - -4.95 - - 3.13 -5.32 -6.17 -12.82 -5.75 - -6.63 - - -7.1 -7.96 - - - - - - - - -
AT3G13640 (RLI1)
1.05 0.11 1.58 1.84 1.24 0.79 1.76 -2.18 -2.73 -4.89 -4.57 - -2.69 -0.0 0.23 -1.43 -0.18 0.3 -0.27 -0.46 1.15 -0.88 -1.14 0.87 -4.91 0.37 -1.94 -1.87 3.68 -5.51 0.94 -2.31 -4.86 -4.31 -1.75 -2.05 -2.28 -2.42 -6.43 - -5.4 -4.07 -2.83 -2.65 -3.46 - -1.15 -2.25
-3.02 -4.69 2.73 3.92 2.33 0.57 3.79 - -3.55 -5.23 -3.67 - - -6.08 - - - - 0.05 -4.7 -6.92 -7.23 -6.73 -2.64 -3.2 -3.3 - -6.68 1.53 -1.98 -4.05 -2.95 -6.06 -6.99 - - -6.68 -0.66 -6.46 - - - - - - - - -
AT3G24220 (NCED6)
0.64 0.51 -2.72 - -3.58 -0.0 -5.64 3.53 -1.67 2.66 0.08 -1.19 -5.21 -2.1 1.01 - - - 1.57 -2.25 -7.04 - - 0.45 0.11 -0.13 -0.45 -1.81 3.5 -0.77 0.81 -0.89 - -6.06 -5.38 - -6.57 -6.35 -8.31 - - - -5.59 - - - - -
-3.2 -1.03 - -9.93 - - -7.84 - -0.33 -11.56 -0.1 - -4.92 -4.43 -3.94 -6.85 -10.12 - -4.92 -3.27 -6.95 -8.59 -9.85 1.37 -1.68 -0.65 -0.59 -2.0 5.3 -1.73 -0.06 -3.4 -7.31 -10.4 -9.46 -8.91 -7.41 -7.26 - - - -7.92 -6.83 - -6.83 - - -
-2.98 -1.05 1.94 2.52 2.56 2.04 3.03 -2.67 -1.96 -2.77 -1.79 -3.53 -2.23 -1.71 -0.66 -0.95 -1.98 -2.02 -1.19 -1.22 -1.12 -1.34 -0.92 -1.03 -3.47 -0.72 -0.47 -2.71 2.39 -2.67 -3.08 -3.29 -2.5 -3.84 -2.89 -0.19 0.7 -0.93 -0.3 -2.91 -3.61 -2.82 -2.33 -2.1 -1.88 -0.37 -1.28 -2.67
- -8.31 1.42 4.08 1.28 -3.72 3.58 - -4.71 -4.93 -4.39 - - - -3.27 -4.26 - - 2.64 -5.19 - - - -4.68 - -5.45 - - 2.87 - - -6.03 -4.84 - - - - - - - - - - - - - - -
-3.01 -4.22 0.79 4.27 0.46 -0.27 4.12 -3.11 -1.02 -7.38 -0.77 -1.88 -6.62 -5.18 -5.69 - - - -3.56 -7.66 - - - -5.68 -5.17 -5.06 - - 2.42 -4.28 -4.02 -6.37 -6.06 - -10.65 - - -6.14 -8.12 - - - - - - - - -6.3
-4.24 -2.54 2.53 3.36 1.14 - 2.37 - - -4.41 -4.01 - - -1.49 -3.87 -3.99 -3.05 -1.78 3.05 -3.05 -5.3 -1.92 -1.43 -0.54 -1.55 -0.67 1.73 -3.83 2.93 -6.69 -2.02 -6.48 -4.56 - -5.84 -0.55 -2.33 -1.67 -4.72 - - -2.94 - - - - - -
- -2.28 3.38 3.22 2.05 -0.99 3.26 - - - - - - - - - - - 0.25 -3.03 - -0.94 - -6.02 - - -0.64 - 3.11 - - - - - - - 1.47 - - - - - - - - - - -
-0.2 -0.1 -0.4 -0.03 -0.02 0.96 -0.1 -1.07 -0.77 -4.66 -1.22 - -0.49 -0.3 -0.63 -0.25 0.65 0.8 0.06 -0.07 1.72 -0.7 -0.49 0.72 -4.03 0.11 -1.22 0.66 2.9 -7.81 0.26 -0.67 -2.36 -0.75 -1.07 -0.22 -2.3 -0.62 -3.94 -1.87 -8.18 -0.66 1.28 0.61 0.28 -0.27 -1.44 0.8
AT4G37050 (PLP4)
-3.59 -0.77 -5.1 -5.55 -4.92 -4.67 -5.22 -7.62 -6.89 -7.61 -6.94 -10.05 -6.17 -3.13 -0.81 -7.6 -7.74 -9.49 -8.92 0.36 2.45 -8.6 -8.14 1.29 0.55 1.11 3.17 -0.81 4.48 -0.55 -0.46 -6.62 -5.34 -3.52 -5.98 -7.58 - -6.19 -6.78 - - -5.0 -4.13 -8.5 -5.38 -3.57 - -6.0
-1.09 -0.88 2.39 2.78 2.33 1.62 2.68 -2.68 -3.39 -3.8 -3.09 -2.16 -3.6 -1.25 -4.69 -2.91 -4.91 -4.15 1.15 -2.04 -2.55 -3.52 -3.39 0.09 -2.62 -0.75 -0.37 -1.58 2.68 -2.76 0.76 -3.52 -2.85 -2.45 -1.05 -2.79 -1.35 -1.69 -1.36 -2.95 -5.33 -0.63 -3.67 -3.59 -2.5 0.72 -7.34 -5.46
-2.02 -6.76 3.29 3.88 2.71 0.08 3.41 -3.48 -4.33 -4.77 -3.28 - -5.49 -9.33 -6.69 -7.54 - - 0.4 -5.57 - - - -5.88 -9.17 -5.13 -8.89 -8.64 1.5 - -8.85 -8.9 -7.46 -9.19 - -5.76 -3.7 -6.63 -1.51 -7.72 - - - - - - - -
2.14 0.08 -6.97 -6.05 -5.26 -5.16 -7.48 -10.06 - -7.52 -9.12 -8.11 2.88 -0.11 -5.48 -7.82 - - -8.45 -2.13 -5.86 - - 2.51 -7.52 0.65 -6.42 -2.92 4.51 -8.73 1.83 -7.55 - -4.01 -9.2 -6.96 - -9.15 -10.31 - - - - - -9.45 - - -10.64
-0.67 -1.35 1.44 2.49 1.31 1.25 2.32 -2.26 -2.15 -5.22 -3.99 -10.28 -9.13 -1.27 -1.8 -1.79 -1.71 -1.18 -0.88 -1.34 -0.65 -1.52 -1.15 0.37 -3.65 -0.53 -1.53 -1.24 2.81 -2.92 -0.57 -1.22 -3.48 -1.15 -2.41 -1.09 -2.05 -1.95 -4.35 -4.98 -2.78 1.49 0.67 -0.96 0.6 1.72 -1.78 0.14
-1.01 -4.82 2.29 2.77 2.86 1.46 2.86 -5.41 -4.66 -4.02 -3.3 - -6.26 -3.37 -5.16 -4.51 -4.82 -7.37 -2.54 -6.6 -7.33 -7.36 -7.2 -2.09 -4.09 -2.8 -0.14 -5.61 3.07 -4.35 -6.56 -2.9 -2.49 -2.84 -5.94 -0.19 1.73 -2.71 -0.35 -2.03 -4.74 -0.09 -1.54 -3.01 -0.59 - -8.04 -3.43
1.99 0.37 2.1 1.71 1.68 1.04 1.6 0.33 -1.12 -0.59 -2.19 0.49 -1.26 -2.85 -0.22 -7.25 - -9.17 -0.14 0.66 -0.9 -6.56 -6.85 0.2 -1.98 -0.45 -1.25 -2.82 3.63 -1.64 -0.19 -1.6 -7.57 -4.71 -6.0 - -7.15 0.8 -11.64 - - - -8.76 - -7.17 - - -
- -11.06 1.71 3.07 3.08 3.22 3.45 -1.11 -0.58 -2.67 -2.02 - -4.95 -6.2 -3.94 -8.84 - - -4.82 -9.78 -7.95 - - -0.03 - -1.5 - -4.24 2.11 - -3.37 -2.52 - - - - - -12.16 - - - - - - - - - -
2.43 1.88 - -6.87 - - - - - - - - - -3.16 -0.89 -6.97 - -7.42 -6.55 0.22 -5.65 - - 2.28 -1.56 0.79 -2.3 -1.93 4.72 -2.88 1.55 -6.13 -7.38 -9.21 -7.54 -5.37 -6.85 -3.84 -7.39 - - -4.37 -5.31 -6.29 - - - -7.96
0.57 2.32 - - - -3.46 - - - - - - - -2.66 -0.68 -6.68 - - -3.81 0.4 -2.14 - - 2.02 -5.92 0.4 -3.66 -2.54 4.89 - 1.8 -5.2 -8.07 -3.72 -6.94 -5.66 - -6.68 -7.76 - - -3.66 -5.57 - - - - -
-3.79 -0.41 -1.04 0.89 -3.51 -3.47 -0.53 - - - - - - -2.35 -2.34 - - - - -0.99 -3.75 -3.37 -1.78 1.86 -3.74 1.04 -4.27 0.64 5.06 - 0.05 -5.08 - -3.94 -3.46 - - -2.51 - -1.64 -3.98 - -3.3 - - - -4.31 -5.51
-3.79 -0.41 -1.04 0.89 -3.51 -3.47 -0.53 - - - - - - -2.35 -2.34 - - - - -0.99 -3.75 -3.37 -1.78 1.86 -3.74 1.04 -4.27 0.64 5.06 - 0.05 -5.08 - -3.94 -3.46 - - -2.51 - -1.64 -3.98 - -3.3 - - - -4.31 -5.51
- -3.04 2.99 3.42 3.35 0.44 3.42 -4.54 -4.37 -3.76 - - -4.7 -3.48 -1.93 - -3.14 - 0.82 -5.02 - - - -1.67 - -1.78 - -1.88 1.44 - -4.27 -4.22 -4.08 -4.01 -4.14 -3.0 -3.89 -3.66 -7.86 - - -3.0 -2.34 - - - - -5.1
- -3.05 - 4.27 - - 3.99 - 0.07 - -1.47 - - - - - - - - - - - - - - - - - 3.45 - - - - -6.54 - - - -1.65 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.