AT5G27920

Description : F-box family protein

Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G27920

Target	Alias	Description	ECC score	Gene Family Method
Aop_g06998	No alias	substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Ceric.29G026300.1	Ceric.29G026300	substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dac_g38488	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
MA_10426597g0010	No alias	F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Smo75506	No alias	F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	452	476
IPR001611	Leu-rich_rpt	200	219
IPR001611	Leu-rich_rpt	349	373
IPR001611	Leu-rich_rpt	479	501
IPR001611	Leu-rich_rpt	426	449

External Links

No external refs found!