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  5. AT5G24610

AT5G24610


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0008223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24610
Cluster HCCA: Cluster_97


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA

No InterPro domains available for this sequence

No external refs found!