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  5. Pnu_g31212

Pnu_g31212 (EIF3C, EIF3C-1,...)


Aliases : EIF3C, EIF3C-1, ATTIF3C1, TIF3C1, ATEIF3C-1

Description : component *(eIF3c) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0003384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g31212
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aop_g06210 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g69269 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.11G061000.1 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Dac_g16185 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Dde_g22171 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ore_g17349 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g52345 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Spa_g22534 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
MF GO:0031369 translation initiation factor binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008905 EIF3C_N_dom 36 216
IPR000717 PCI_dom 225 353
No external refs found!