AT5G19340

Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink).

Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G19340
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AT4G34419	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.08	OrthoFinder output from all 47 species
AT5G66800	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.01	OrthoFinder output from all 47 species
Adi_g116381	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01320	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06672	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g27098	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene54470.t1	Aspi01Gene54470	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G006200.1	Ceric.13G006200	not classified & original description: pacid=50636536...	0.03	OrthoFinder output from all 47 species
Dac_g09049	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g25297	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g40338	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19449	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os02g06960.1	LOC_Os02g06960	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os02g52490.2	LOC_Os02g52490	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os04g52800.1	LOC_Os04g52800	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os12g41660.1	LOC_Os12g41660	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g11864	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g15147	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04362	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19916	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g108170.3.1	Solyc01g108170	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc06g054280.1.1	Solyc06g054280	no hits & (original description: none)	0.12	OrthoFinder output from all 47 species
Tin_g10999	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g14730	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003802_P001	Zm00001e003802	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Zm00001e013706_P001	Zm00001e013706	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e015934_P003	Zm00001e015934	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e023821_P002	Zm00001e023821	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e030336_P001	Zm00001e030336	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006084	acetyl-CoA metabolic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004737	pyruvate decarboxylase activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
BP	GO:0005513	detection of calcium ion	IEP	HCCA
BP	GO:0009593	detection of chemical stimulus	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
MF	GO:0010294	abscisic acid glucosyltransferase activity	IEP	HCCA
MF	GO:0015105	arsenite transmembrane transporter activity	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
BP	GO:0015700	arsenite transport	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
BP	GO:0051592	response to calcium ion	IEP	HCCA
BP	GO:0051645	Golgi localization	IEP	HCCA
BP	GO:0051646	mitochondrion localization	IEP	HCCA
BP	GO:0060151	peroxisome localization	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G19340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation