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  5. Pnu_g31183

Pnu_g31183 (PSBR)


Aliases : PSBR

Description : component *(PsbR) of PS-II complex & original description: none


Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g31183
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT1G79040 PSBR photosystem II subunit R 0.04 OrthoFinder output from all 47 species
Adi_g011483 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05205 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35440 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62878 PSBR component *(PsbR) of PS-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Aob_g00417 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g15188 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27127 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17008 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g21838 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g30771 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G086200.1 PSBR, Ceric.20G086200 component *(PsbR) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Cre06.g261000 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Dcu_g25420 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28297 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g00341 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04149 PSBR component PsbR of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g05360.1 PSBR, LOC_Os07g05360 component PsbR of PS-II complex 0.01 OrthoFinder output from all 47 species
Lfl_g16031 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g19724 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g05840.1 PSBR component PsbR of PS-II complex 0.04 OrthoFinder output from all 47 species
Ore_g06143 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06144 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23258 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_5650V3.1 PSBR, Pp3c16_5650 photosystem II subunit R 0.03 OrthoFinder output from all 47 species
Pp3c27_2340V3.1 PSBR, Pp3c27_2340 photosystem II subunit R 0.01 OrthoFinder output from all 47 species
Ppi_g12355 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g12785 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12793 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g27322 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g27323 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g12723 No alias component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021601_P001 PSBR, Zm00001e021601 component PsbR of PS-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 38 143
No external refs found!