AT5G15450 (CLPB3, CLPB-P, APG6)

Aliases : CLPB3, CLPB-P, APG6

Description : casein lytic proteinase B3

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15450

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00179810	CLPB4, CLPB-M,...	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
AMTR_s00086p00119290	ATHSP101, HOT1,...	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Adi_g010878	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01489	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15718	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g44000	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11008	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11015	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g12962	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13437	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene47646.t1	ATHSP101, HOT1,...	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0176.g056069	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.30G013400.1	SAG15, CLPD,...	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Cre02.g090850	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Cre02.g143307	No alias	No description available	0.02	OrthoFinder output from all 47 species
Cre11.g467644	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Cre43.g760497	HSP93-V, DCA1,...	Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g01014	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g05146	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g11203	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g14071	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g13807	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g40536	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g06117	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g14780	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g23626	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29771	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007880001	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.06	OrthoFinder output from all 47 species
GSVIVT01011496001	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.05	OrthoFinder output from all 47 species
GSVIVT01035900001	CLPB4, CLPB-M, HSP98.7	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Gb_39383	ATHSP101, HOT1, HSP101	cytosolic chaperone (Hsp101)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08490.1	CLPB4, CLPB-M,...	organellar chaperone (Clp-p\|Clp-m)	0.05	OrthoFinder output from all 47 species
LOC_Os03g31300.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.05	OrthoFinder output from all 47 species
LOC_Os05g44340.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.05	OrthoFinder output from all 47 species
LOC_Os12g12850.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Mp1g16450.1	ATHSP101, HOT1, HSP101	cytosolic chaperone (Hsp101)	0.03	OrthoFinder output from all 47 species
Msp_g12931	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Msp_g48913	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g12640	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.06	OrthoFinder output from all 47 species
Pp3c19_4790V3.1	ATHSP101, HOT1,...	heat shock protein 101	0.02	OrthoFinder output from all 47 species
Ppi_g10767	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g52861	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g17391	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36359	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo170696	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Smo174539	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Smo411118	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Solyc02g088610.4.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.04	OrthoFinder output from all 47 species
Solyc03g115230.3.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.04	OrthoFinder output from all 47 species
Solyc03g117950.3.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Solyc06g011370.4.1	CLPB4, CLPB-M,...	Chaperone protein ClpB3, mitochondrial OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Solyc06g011380.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc06g011400.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Spa_g08654	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g17937	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18896	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g46726	ATHSP101, HOT1, HSP101	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g04164	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e002026_P002	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.05	OrthoFinder output from all 47 species
Zm00001e032223_P001	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.06	OrthoFinder output from all 47 species
Zm00001e038056_P001	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEP	Interproscan
BP	GO:0009408	response to heat	ISS	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009532	plastid stroma	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003713	transcription coactivator activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009723	response to ethylene	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0009873	ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	170	221
IPR004176	Clp_R_dom	95	144
IPR003959	ATPase_AAA_core	676	843
IPR019489	Clp_ATPase_C	850	928
IPR003959	ATPase_AAA_core	279	411

External Links

No external refs found!

AT5G15450 (CLPB3, CLPB-P, APG6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation