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  5. AT5G14540

AT5G14540


Description : Protein of unknown function (DUF1421)


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G14540

Target Alias Description ECC score Gene Family Method Actions
Aop_g18613 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G080900.1 Ceric.23G080900 E4 polyubiquitination factor *(UAP) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g02947 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032424001 No alias No description available 0.05 OrthoFinder output from all 47 species
MA_10428704g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7362g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g12800.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g26880 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00949 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28018 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053990.4.1 Solyc07g053990 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc10g008340.4.1 Solyc10g008340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g035240.2.1 Solyc12g035240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016775_P001 Zm00001e016775 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029034_P002 Zm00001e029034 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005798 Golgi-associated vesicle IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030140 trans-Golgi network transport vesicle IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0045324 late endosome to vacuole transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 483 526
No external refs found!