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  5. AT5G13720

AT5G13720


Description : Uncharacterised protein family (UPF0114)


Gene families : OG0001387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G13720
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00263350 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g002396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52268 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g00515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0046.g030133 No alias not classified & original description: CDS=348-1217 0.08 OrthoFinder output from all 47 species
Cba_g03052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z152400.1 Ceric.1Z152400 not classified & original description: pacid=50598814... 0.08 OrthoFinder output from all 47 species
GSVIVT01032192001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os06g49640.1 LOC_Os06g49640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g46330.1 LOC_Os07g46330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00521 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_184655g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g11739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34693 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006077 No alias not classified & original description: CDS=777-1349 0.03 OrthoFinder output from all 47 species
Solyc01g087680.4.1 Solyc01g087680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e010892_P001 Zm00001e010892 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009706 chloroplast inner membrane IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010190 cytochrome b6f complex assembly IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010478 chlororespiration IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR005134 UPF0114 87 225
No external refs found!