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  5. AT5G12340

AT5G12340


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0005743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00245800 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00063p00151320 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G28190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
GSVIVT01037265001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_10892 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_11824 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_26414 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g72360.1 LOC_Os01g72360 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g24100.1 LOC_Os03g24100 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g46510.1 LOC_Os07g46510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g33050.1 LOC_Os11g33050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10248626g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10381881g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_118095g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_168522g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_223132g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_311429g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5824616g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_74636g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_88642g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g057830.1.1 Solyc04g057830 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e018591_P001 Zm00001e018591 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031559_P001 Zm00001e031559 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e038180_P001 Zm00001e038180 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 38 199
No external refs found!