AT5G12060


Description : Plant self-incompatibility protein S1 family


Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12060

Target Alias Description ECC score Gene Family Method Actions
AT4G24973 No alias Plant self-incompatibility protein S1 family 0.04 OrthoFinder output from all 47 species
GSVIVT01014872001 No alias S-protein homolog 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01014873001 No alias S-protein homolog 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014874001 No alias S-protein homolog 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01014884001 No alias S-protein homolog 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g46817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c23_19990V3.1 Pp3c23_19990 Plant self-incompatibility protein S1 family 0.02 OrthoFinder output from all 47 species
Solyc05g053460.1.1 Solyc05g053460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g091310.1.1 Solyc09g091310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g091320.1.1 Solyc09g091320 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR010264 Self-incomp_S1 39 144
No external refs found!