AT5G11260 (TED 5, HY5)

Aliases : TED 5, HY5

Description : Basic-leucine zipper (bZIP) transcription factor family protein

Gene families : OG0002588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002588_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G11260

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00145150	HYH,...	External stimuli response.light.UV-B light.UV-B signal...	0.05	OrthoFinder output from all 47 species
Ala_g14228	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.04	OrthoFinder output from all 47 species
Cba_g09113	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Ceric.14G091500.1	HYH, Ceric.14G091500	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Ceric.1Z124000.1	Ceric.1Z124000	not classified & original description: pacid=50620924...	0.06	OrthoFinder output from all 47 species
Cre06.g310500	HYH	External stimuli response.light.UV-B light.UV-B signal...	0.02	OrthoFinder output from all 47 species
Ehy_g03125	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.04	OrthoFinder output from all 47 species
Ehy_g08079	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Gb_33985	HYH	transcription factor (bZIP)	0.15	OrthoFinder output from all 47 species
LOC_Os02g10860.1	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.04	OrthoFinder output from all 47 species
LOC_Os06g39960.1	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.03	OrthoFinder output from all 47 species
Msp_g10109	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Sam_g11397	No alias	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Solyc08g061130.3.1	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.05	OrthoFinder output from all 47 species
Tin_g06997	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003690	double-stranded DNA binding	IPI	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006405	RNA export from nucleus	None	Extended
BP	GO:0006406	mRNA export from nucleus	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008284	positive regulation of cell population proliferation	RCA	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	TAS	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	IMP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010074	maintenance of meristem identity	RCA	Interproscan
BP	GO:0010099	regulation of photomorphogenesis	IMP	Interproscan
BP	GO:0010114	response to red light	IEP	Interproscan
BP	GO:0010218	response to far red light	IEP	Interproscan
BP	GO:0010224	response to UV-B	IMP	Interproscan
BP	GO:0010224	response to UV-B	IGI	Interproscan
BP	GO:0010224	response to UV-B	IEP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019722	calcium-mediated signaling	RCA	Interproscan
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	None	Extended
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IMP	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042752	regulation of circadian rhythm	None	Extended
BP	GO:0042753	positive regulation of circadian rhythm	IMP	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	RCA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051028	mRNA transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051276	chromosome organization	RCA	Interproscan
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000030	regulation of response to red or far red light	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009813	flavonoid biosynthetic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0018708	thiol S-methyltransferase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019759	glycosinolate catabolic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019762	glucosinolate catabolic process	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	86	147

External Links

No external refs found!

AT5G11260 (TED 5, HY5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation