AT5G11100 (NTMC2TYPE2.2, SYTD,...)

Aliases : NTMC2TYPE2.2, SYTD, SYT4, NTMC2T2.2, ATSYTD

Description : Calcium-dependent lipid-binding (CaLB domain) family protein

Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G11100

Target	Alias	Description	ECC score	Gene Family Method
Adi_g002005	SYT5, NTMC2T2.1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g24226	NTMC2TYPE4, NTMC2T4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0217.g058505	SYT5, NTMC2T2.1,...	not classified & original description: CDS=917-1921	0.04	OrthoFinder output from all 47 species
Ceric.02G074700.1	NTMC2T1.2, SYTB,...	membrane tethering protein (SYT1) of...	0.02	OrthoFinder output from all 47 species
Ceric.1Z077000.1	SYT5, NTMC2T2.1,...	not classified & original description: pacid=50588705...	0.02	OrthoFinder output from all 47 species
Ehy_g08475	NTMC2TYPE4, NTMC2T4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g01203	NTMC2T1.2, SYTB,...	membrane tethering protein (SYT1) of...	0.03	OrthoFinder output from all 47 species
Nbi_g09577	NTMC2T1.2, SYTB,...	membrane tethering protein (SYT1) of...	0.01	OrthoFinder output from all 47 species
Ore_g17254	SYT5, NTMC2T2.1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010638	positive regulation of organelle organization	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000008	C2_dom	264	368
IPR000008	C2_dom	443	545
IPR039010	Synaptotagmin_SMP	70	250

External Links

No external refs found!

AT5G11100 (NTMC2TYPE2.2, SYTD,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation