Aliases : KNAT4
Description : KNOTTED1-like homeobox gene 4
Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G11060 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G62360 | BUM1, SHL, STM,... | KNOX/ELK homeobox transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Aev_g21619 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g31921 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g17223 | KNAT3 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g27530 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.13G020400.1 | KNAT3, Ceric.13G020400 | KNOX-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g30696 | KNAT3 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01035921001 | KNAT3 | RNA biosynthesis.transcriptional activation.HB... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os07g03770.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05424 | KNAT3 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g25139 | KNAT3 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g25529 | BP, BP1, KNAT1 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g25530 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g31221 | KNAT4 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g007120.3.1 | KNAT3, Solyc07g007120 | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g041820.3.1 | KNAT3, Solyc08g041820 | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000173_P003 | KNAT7, IXR11,... | transcription factor (KNOX) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005545_P001 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005547_P001 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011538_P001 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027562_P001 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029453_P001 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e032761_P001 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
CC | GO:0005634 | nucleus | NAS | Interproscan |
CC | GO:0005737 | cytoplasm | NAS | Interproscan |
CC | GO:0005829 | cytosol | IDA | Interproscan |
BP | GO:0009416 | response to light stimulus | IEP | Interproscan |
BP | GO:0048513 | animal organ development | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004565 | beta-galactosidase activity | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | HCCA |
CC | GO:0009507 | chloroplast | IEP | HCCA |
CC | GO:0009528 | plastid inner membrane | IEP | HCCA |
CC | GO:0009536 | plastid | IEP | HCCA |
CC | GO:0009706 | chloroplast inner membrane | IEP | HCCA |
MF | GO:0009815 | 1-aminocyclopropane-1-carboxylate oxidase activity | IEP | HCCA |
BP | GO:0010044 | response to aluminum ion | IEP | HCCA |
BP | GO:0010073 | meristem maintenance | IEP | HCCA |
BP | GO:0010154 | fruit development | IEP | HCCA |
BP | GO:0010191 | mucilage metabolic process | IEP | HCCA |
BP | GO:0010192 | mucilage biosynthetic process | IEP | HCCA |
MF | GO:0015925 | galactosidase activity | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015996 | chlorophyll catabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
MF | GO:0016715 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
BP | GO:0031056 | regulation of histone modification | IEP | HCCA |
BP | GO:0031063 | regulation of histone deacetylation | IEP | HCCA |
CC | GO:0031969 | chloroplast membrane | IEP | HCCA |
MF | GO:0032441 | pheophorbide a oxygenase activity | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046149 | pigment catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048354 | mucilage biosynthetic process involved in seed coat development | IEP | HCCA |
BP | GO:0048359 | mucilage metabolic process involved in seed coat development | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0090311 | regulation of protein deacetylation | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
No external refs found! |