AT5G09410 (EICBP.B, CAMTA1)

Aliases : EICBP.B, CAMTA1

Description : ethylene induced calmodulin binding protein

Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G09410
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
AT2G22300	CAMTA3, SR1	signal responsive 1	0.05	OrthoFinder output from all 47 species
Aev_g14283	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene48770.t1	Aspi01Gene48770	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.12G055700.1	CAMTA3, SR1,...	CAMTA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G019600.1	Ceric.31G019600	CAMTA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Gb_04014	No alias	transcription factor (CAMTA)	0.02	OrthoFinder output from all 47 species
LOC_Os03g09100.1	CAMTA3, SR1,...	transcription factor (CAMTA)	0.02	OrthoFinder output from all 47 species
LOC_Os03g27080.1	CAMTA3, SR1,...	transcription factor (CAMTA)	0.02	OrthoFinder output from all 47 species
Pir_g41818	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g47822	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g07183	No alias	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e037974_P002	CAMTA3, SR1,...	transcription factor (CAMTA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	IEP	Interproscan
MF	GO:0005516	calmodulin binding	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IMP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050826	response to freezing	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0005457	GDP-fucose transmembrane transporter activity	IEP	HCCA
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	HCCA
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
BP	GO:0006493	protein O-linked glycosylation	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008142	oxysterol binding	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009691	cytokinin biosynthetic process	IEP	HCCA
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	HCCA
CC	GO:0009897	external side of plasma membrane	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0010921	regulation of phosphatase activity	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015783	GDP-fucose transmembrane transport	IEP	HCCA
BP	GO:0015786	UDP-glucose transmembrane transport	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019212	phosphatase inhibitor activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0036080	purine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048513	animal organ development	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	HCCA
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	HCCA
BP	GO:0062197	cellular response to chemical stress	IEP	HCCA
BP	GO:0071470	cellular response to osmotic stress	IEP	HCCA
BP	GO:0072334	UDP-galactose transmembrane transport	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0080163	regulation of protein serine/threonine phosphatase activity	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
BP	GO:0090480	purine nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
CC	GO:0098552	side of membrane	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000048	IQ_motif_EF-hand-BS	828	847
IPR000048	IQ_motif_EF-hand-BS	806	823
IPR005559	CG-1_dom	24	137
IPR020683	DUF3447	576	654
IPR002909	IPT_dom	394	469

External Links

No external refs found!

AT5G09410 (EICBP.B, CAMTA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation