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  5. AT5G08230

AT5G08230


Description : Tudor/PWWP/MBT domain-containing protein


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08230
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Adi_g019417 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11061 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15874 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22454 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009802 HUA2 HUA2-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g72521 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08999 No alias HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012049001 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.03 OrthoFinder output from all 47 species
Len_g21971 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16391 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24326 No alias HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11569 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.04 OrthoFinder output from all 47 species
Zm00001e029104_P001 HUA2, Zm00001e029104 transcription factor (HUA2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005652 nuclear lamina IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0010071 root meristem specification IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
MF GO:0010178 IAA-amino acid conjugate hydrolase activity IEP HCCA
MF GO:0010179 IAA-Ala conjugate hydrolase activity IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016032 viral process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
CC GO:0034399 nuclear periphery IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044001 migration in host IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046740 transport of virus in host, cell to cell IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0080022 primary root development IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 19 105
No external refs found!