1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G05530

AT5G05530


Description : RING/U-box superfamily protein


Gene families : OG0008195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008195_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G05530

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00233020 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0048316 seed development IEP HCCA
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 146 190
No external refs found!