Aliases : YCF32, PSBY
Description : component *(PsbY) of PS-II complex & original description: none
Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pnu_g31046 | |
Cluster | HCCA: Cluster_64 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00157390 | YCF32, PSBY,... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.04 | OrthoFinder output from all 47 species | |
AT1G67740 | YCF32, PSBY | photosystem II BY | 0.07 | OrthoFinder output from all 47 species | |
Als_g00686 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g09607 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g15370 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aob_g17372 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.33G057000.1 | YCF32, PSBY,... | component *(PsbY) of PS-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g452100 | No alias | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g51618 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Dde_g25972 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g00811 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_22296 | YCF32, PSBY | component PsbY of PS-II complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g02630.1 | YCF32, PSBY,... | component PsbY of PS-II complex | 0.02 | OrthoFinder output from all 47 species | |
MA_12201g0010 | YCF32, PSBY | component PsbY of PS-II complex | 0.03 | OrthoFinder output from all 47 species | |
Mp8g12730.1 | YCF32, PSBY | component PsbY of PS-II complex | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g00114 | YCF32, PSBY | component *(PsbY) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g20798 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Solyc10g077120.3.1 | YCF32, PSBY,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009523 | photosystem II | IEA | Interproscan |
BP | GO:0015979 | photosynthesis | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0030145 | manganese ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009388 | PSII_PsbY | 86 | 118 |
No external refs found! |