AT5G04760

Description : Duplicated homeodomain-like superfamily protein

Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G04760

Target	Alias	Description	ECC score	Gene Family Method
AT1G74840	No alias	Homeodomain-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G05790	No alias	Duplicated homeodomain-like superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g004593	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g007078	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Adi_g012577	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.06	OrthoFinder output from all 47 species
Adi_g013787	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g021554	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Adi_g075106	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g10215	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Aev_g24499	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Aev_g30623	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Als_g21935	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Als_g48089	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Als_g48090	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Als_g49186	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Als_g61095	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Aob_g01227	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Aob_g04213	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Aob_g22310	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene05859.t1	Aspi01Gene05859	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene72735.t1	Aspi01Gene72735	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0084.g038982	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0160.g054011	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.06	OrthoFinder output from all 47 species
Cba_g13543	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Ceric.22G032800.1	Ceric.22G032800	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.07	OrthoFinder output from all 47 species
Ceric.30G065000.1	Ceric.30G065000	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021123.16	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Dac_g03644	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g39065	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Dde_g05736	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Dde_g25023	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g08181	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g27445	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01016370001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01036090001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Gb_28483	No alias	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
LOC_Os01g04930.1	LOC_Os01g04930	transcription factor (MYB-related)	0.06	OrthoFinder output from all 47 species
LOC_Os01g09640.1	LOC_Os01g09640	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
LOC_Os01g63460.1	LOC_Os01g63460	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
LOC_Os01g64360.1	LOC_Os01g64360	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
LOC_Os04g58020.1	LOC_Os04g58020	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
LOC_Os05g37060.1	LOC_Os05g37060	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
LOC_Os05g37730.1	LOC_Os05g37730	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Len_g00582	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Len_g12267	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Len_g31113	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Len_g41469	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Lfl_g03042	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
MA_11322g0010	No alias	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
MA_17466g0010	No alias	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Mp5g11830.1	No alias	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
Nbi_g13154	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ore_g06156	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ore_g21324	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Ore_g29667	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Pir_g09385	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Pir_g10678	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Pir_g37642	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g06884	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013013	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Sam_g50035	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Spa_g25282	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Spa_g47678	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Tin_g06825	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e006540_P001	Zm00001e006540	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e037865_P001	Zm00001e037865	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010286	heat acclimation	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0016233	telomere capping	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0043687	post-translational protein modification	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	100	144

External Links

No external refs found!

AT5G04760

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation