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  5. Pnu_g31037

Pnu_g31037


Description : not classified & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g31037
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00025840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT3G48950 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G23820 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g06573 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37014 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20891.t1 Aspi01Gene20891 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23222.t2 Aspi01Gene23222 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G027000.1 Ceric.37G027000 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g02823 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29621 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26386 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019405001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50960.1 LOC_Os05g50960 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Len_g04743 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_12554g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.01 OrthoFinder output from all 47 species
MA_9467735g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Msp_g24778 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04774 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43812 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24209 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024829_P001 Zm00001e024829 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e026646_P002 Zm00001e026646 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 66 122
No external refs found!