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  5. AT5G01460

AT5G01460


Description : LMBR1-like membrane protein


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01460

Target Alias Description ECC score Gene Family Method Actions
Aev_g02363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011127 No alias not classified & original description: CDS=78-1616 0.04 OrthoFinder output from all 47 species
Ceric.34G014800.1 Ceric.34G014800 not classified & original description: pacid=50622851... 0.03 OrthoFinder output from all 47 species
Dac_g02814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033959001 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.11 OrthoFinder output from all 47 species
Len_g59363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10078g0020 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g13114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo75198 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc09g005310.3.1 Solyc09g005310 LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g12622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029882_P001 Zm00001e029882 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005797 Golgi medial cisterna IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005874 microtubule IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031985 Golgi cisterna IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071258 cellular response to gravity IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 278 487
IPR006876 LMBR1-like_membr_prot 9 275
No external refs found!