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  5. AT5G01160

AT5G01160


Description : RING/U-box superfamily protein


Gene families : OG0005692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01160
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Aob_g01611 No alias E3 ubiquitin ligase component *(HAKAI) of adenosine... 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053859 No alias E3 ubiquitin ligase component *(HAKAI) of adenosine... 0.03 OrthoFinder output from all 47 species
Ehy_g11619 No alias E3 ubiquitin ligase component *(HAKAI) of adenosine... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005819 spindle IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043153 entrainment of circadian clock by photoperiod IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0080175 phragmoplast microtubule organization IEP HCCA
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP HCCA
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!