Description : Histone superfamily protein
Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G09200 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G27360 | No alias | Histone superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G65360 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g014654 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g06864 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g11657 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cre16.g661450 | No alias | Cell cycle.mitosis and meiosis.chromosome... | 0.02 | OrthoFinder output from all 47 species | |
Gb_27618 | No alias | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Len_g04468 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g41988 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c18_12280V3.1 | Pp3c18_12280 | Histone superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g03537 | No alias | histone H3 variant *(CENH3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g20165 | No alias | histone H3 variant *(CENH3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g079110.4.1 | Solyc01g079110 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g56178 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
CC | GO:0000785 | chromatin | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
BP | GO:0006007 | glucose catabolic process | IEP | HCCA |
BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
BP | GO:0016032 | viral process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0019320 | hexose catabolic process | IEP | HCCA |
MF | GO:0030527 | structural constituent of chromatin | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0046365 | monosaccharide catabolic process | IEP | HCCA |
BP | GO:0046786 | viral replication complex formation and maintenance | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
No external refs found! |