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  5. AT4G38520

AT4G38520


Description : Protein phosphatase 2C family protein


Gene families : OG0000288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38520

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00096750 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
AT5G02760 No alias Protein phosphatase 2C family protein 0.05 OrthoFinder output from all 47 species
Adi_g059572 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05276 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17630 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47023.t1 Aspi01Gene47023 clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13542 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G035700.1 Ceric.11G035700 clade D phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g13370 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07486 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02131 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04674 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033496001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
GSVIVT01034979001 No alias Protein modification.dephosphorylation.serine/threonine... 0.05 OrthoFinder output from all 47 species
Len_g59801 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02752 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13566 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10329 No alias clade D phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33911 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59761 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10546 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16622 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g065920.4.1 Solyc06g065920 clade D phosphatase 0.05 OrthoFinder output from all 47 species
Zm00001e005757_P001 Zm00001e005757 clade D phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004722 protein serine/threonine phosphatase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:2000904 regulation of starch metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 79 324
No external refs found!