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  5. AT4G38340

AT4G38340


Description : Plant regulator RWP-RK family protein


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38340

Target Alias Description ECC score Gene Family Method Actions
AT1G64530 No alias Plant regulator RWP-RK family protein 0.04 OrthoFinder output from all 47 species
Aob_g25548 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06521 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09074 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33361.t1 NLP7, Aspi01Gene33361 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G064900.1 Ceric.01G064900 NLP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g37925 No alias transcription factor *(NIN) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22670 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35703 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29547 NLP7 transcription factor *(NIN) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g082480.3.1 Solyc04g082480 transcription factor (NLP). transcription factor (NIN) 0.03 OrthoFinder output from all 47 species
Spa_g24845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40097 NLP7 transcription factor *(NIN) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013603_P001 Zm00001e013603 transcription factor (NLP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008453 alanine-glyoxylate transaminase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010036 response to boron-containing substance IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010158 abaxial cell fate specification IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015105 arsenite transmembrane transporter activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
CC GO:0016328 lateral plasma membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0046713 borate transport IEP HCCA
MF GO:0046715 active borate transmembrane transporter activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0080029 cellular response to boron-containing substance levels IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 674 758
IPR003035 RWP-RK_dom 498 546
No external refs found!