Aliases : DOF4.7
Description : DNA binding with one finger 4.7
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00058p00210070 | TMO6,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00059p00213350 | ADOF1, DOF1,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AT4G21040 | No alias | Dof-type zinc finger domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g081944 | OBP4 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g084666 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g106349 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g113667 | OBP4 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g11360 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06838 | DAG1 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g04342 | OBP4 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g36307 | TMO6 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g67430 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene01246.t1 | Aspi01Gene01246 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene34893.t1 | OBP4, Aspi01Gene34893 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44459.t1 | Aspi01Gene44459 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene53704.t2 | ADOF1, DOF1,... | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene66325.t1 | OBP3, Aspi01Gene66325 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000476 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1320 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0166.g054389 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1341 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s4159.g118156 | TMO6 | transcription factor *(DOF) & original description: CDS=1-876 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.11G014800.1 | Ceric.11G014800 | transcription factor *(DOF) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.19G053600.1 | ADOF1, DOF1,... | transcription factor *(DOF) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G046000.1 | OBP4, Ceric.35G046000 | transcription factor *(DOF) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g31456 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g13892 | OBP1 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g26661 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g26839 | CDF1 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01003947001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007758001 | HCA2, DOF5.6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01016538001 | OBP3 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021085001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031841001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.07 | OrthoFinder output from all 47 species | |
Gb_20867 | CDF3 | Cyclic dof factor 3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g15350.1 | LOC_Os02g15350 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g47810.1 | HCA2, DOF5.6,... | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g16850.1 | OBP3, LOC_Os03g16850 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g55610.1 | ADOF2, DOF2,... | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g47990.1 | LOC_Os04g47990 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g02150.1 | OBP3, LOC_Os05g02150 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g38200.1 | LOC_Os12g38200 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
Len_g14959 | OBP3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_16692g0010 | TMO6 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
MA_56828g0010 | No alias | transcription factor (DOF) | 0.07 | OrthoFinder output from all 47 species | |
MA_83624g0010 | TMO6 | transcription factor (DOF) | 0.05 | OrthoFinder output from all 47 species | |
Ore_g03879 | OBP4 | transcription factor *(DOF) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g32242 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g32243 | TMO6 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g41458 | OBP4 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g01905 | DOF2.4, ATDOF2.4 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g32406 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g11813 | TMO6 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g03743 | ADOF1, DOF1 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g09266 | No alias | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g32547 | CDF3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g32548 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g61204 | OBP4 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26799 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g43145 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g49468 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g50082 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g078620.1.1 | ADOF2, DOF2,... | transcription factor (DOF) | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g076030.3.1 | Solyc06g076030 | transcription factor (DOF) | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g082910.2.1 | Solyc08g082910 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g31006 | TMO6 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g25380 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002951_P002 | Zm00001e002951 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005785_P001 | ADOF2, DOF2,... | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006527_P001 | Zm00001e006527 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010454_P001 | TMO6, Zm00001e010454 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012824_P001 | CDF1, Zm00001e012824 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019172_P001 | Zm00001e019172 | transcription factor (DOF) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e031750_P001 | Zm00001e031750 | transcription factor (DOF) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e041944_P001 | Zm00001e041944 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IDA | Interproscan |
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
BP | GO:0006863 | purine nucleobase transport | RCA | Interproscan |
BP | GO:0010227 | floral organ abscission | IMP | Interproscan |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 40 | 95 |
No external refs found! |