AT4G37180

Description : Homeodomain-like superfamily protein

Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37180

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00093p00110710	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AMTR_s00122p00127250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Ala_g02245	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g07673	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03204.t1	Aspi01Gene03204	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene53882.t1	Aspi01Gene53882	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0114.g046051	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01015462001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
Lfl_g03258	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Msp_g25323	No alias	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pir_g14104	No alias	GARP subgroup HHO transcription factor & original...	0.05	OrthoFinder output from all 47 species
Pir_g22160	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g08565	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Smo402040	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.06	OrthoFinder output from all 47 species
Solyc12g006800.2.1	Solyc12g006800	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g55258	No alias	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Zm00001e011977_P003	Zm00001e011977	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	212	263

External Links

No external refs found!

AT4G37180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation