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  5. AT4G35700

AT4G35700


Description : zinc finger (C2H2 type) family protein


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G35700
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT3G53600 No alias C2H2-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT5G56200 No alias C2H2 type zinc finger transcription factor family 0.05 OrthoFinder output from all 47 species
Dde_g07735 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Dde_g36802 CZF2, ZAT6, C2H2 C2H2-type subclass ZAT transcription factor & original... 0.01 OrthoFinder output from all 47 species
Gb_16419 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g60570.1 LOC_Os03g60570 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g29411 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_30401g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_837209g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g03954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006193 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Solyc06g060480.1.1 Solyc06g060480 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g15487 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Tin_g08659 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Zm00001e011983_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e019350_P001 Zm00001e019350 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e023551_P001 Zm00001e023551 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0048235 pollen sperm cell differentiation IEP Interproscan
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Type GO Term Name Evidence Source
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
CC GO:0042995 cell projection IEP HCCA
CC GO:0048555 generative cell nucleus IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA

No InterPro domains available for this sequence

No external refs found!