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AT4G35670


Description : Pectin lyase-like superfamily protein


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G35670

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250720 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G56710 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
GSVIVT01032114001 QRT2 Polygalacturonase OS=Actinidia deliciosa 0.05 OrthoFinder output from all 47 species
GSVIVT01032117001 QRT2 Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
LOC_Os08g23790.1 LOC_Os08g23790 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.04 OrthoFinder output from all 47 species
Lfl_g19271 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g21140.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g068040.3.1 Solyc06g068040 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 55 376
No external refs found!