AT4G35610

Description : zinc finger (C2H2 type) family protein

Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G35610
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AT2G26940	No alias	C2H2-type zinc finger family protein	0.03	OrthoFinder output from all 47 species
AT3G53600	No alias	C2H2-type zinc finger family protein	0.04	OrthoFinder output from all 47 species
AT5G56200	No alias	C2H2 type zinc finger transcription factor family	0.05	OrthoFinder output from all 47 species
Dde_g07735	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Dde_g36802	CZF2, ZAT6, C2H2	C2H2-type subclass ZAT transcription factor & original...	0.01	OrthoFinder output from all 47 species
LOC_Os03g60570.1	LOC_Os03g60570	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Len_g29411	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
MA_109421g0010	No alias	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Ppi_g03954	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006193	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Solyc06g060480.1.1	Solyc06g060480	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e019350_P001	Zm00001e019350	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
BP	GO:0048235	pollen sperm cell differentiation	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G35610

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation