AT4G35280

Description : C2H2-like zinc finger protein

Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G35280

Target	Alias	Description	ECC score	Gene Family Method
AT1G02040	No alias	C2H2-type zinc finger family protein	0.02	OrthoFinder output from all 47 species
Ceric.13G042600.1	Ceric.13G042600	C2H2-type subclass ZAT transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ehy_g15214	AZF2, ZF2	C2H2-type subclass ZAT transcription factor & original...	0.01	OrthoFinder output from all 47 species
Gb_23552	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Gb_30808	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os04g08060.1	LOC_Os04g08060	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os12g39400.1	ZAT10, STZ,...	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species
Nbi_g41772	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.01	OrthoFinder output from all 47 species
Solyc06g075775.1.1	Solyc06g075775	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030036	actin cytoskeleton organization	RCA	Interproscan
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048235	pollen sperm cell differentiation	IEP	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G35280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation