AT4G35270

Description : Plant regulator RWP-RK family protein

Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G35270

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00009420	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	OrthoFinder output from all 47 species
AMTR_s00044p00173720	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00148680	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
AT1G64530	No alias	Plant regulator RWP-RK family protein	0.06	OrthoFinder output from all 47 species
AT2G17150	No alias	Plant regulator RWP-RK family protein	0.05	OrthoFinder output from all 47 species
AT3G59580	No alias	Plant regulator RWP-RK family protein	0.04	OrthoFinder output from all 47 species
Ala_g02692	NLP7	transcription factor *(NIN) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.28G047000.1	NLP7, Ceric.28G047000	transcription factor *(NIN) & original description:...	0.03	OrthoFinder output from all 47 species
Pir_g22808	No alias	transcription factor *(NIN) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g29513	No alias	transcription factor *(NIN) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29425	NLP7	transcription factor *(NIN) & original description: none	0.03	OrthoFinder output from all 47 species
Smo118918	No alias	RNA biosynthesis.transcriptional activation.NIN-like...	0.04	OrthoFinder output from all 47 species
Solyc01g112190.3.1	Solyc01g112190	transcription factor (NLP). transcription factor (NIN)	0.03	OrthoFinder output from all 47 species
Solyc08g008410.3.1	NLP7, Solyc08g008410	transcription factor (NLP). NLP6/7 nitrate response...	0.03	OrthoFinder output from all 47 species
Solyc08g082750.3.1	NLP7, Solyc08g082750	transcription factor (NLP). NLP6/7 nitrate response...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0006995	cellular response to nitrogen starvation	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009813	flavonoid biosynthetic process	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015204	urea transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015293	symporter activity	IEP	HCCA
MF	GO:0015294	solute:monoatomic cation symporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015370	solute:sodium symporter activity	IEP	HCCA
BP	GO:0015695	organic cation transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0016602	CCAAT-binding factor complex	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
BP	GO:0043562	cellular response to nitrogen levels	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071241	cellular response to inorganic substance	IEP	HCCA
BP	GO:0071249	cellular response to nitrate	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901699	cellular response to nitrogen compound	IEP	HCCA
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	HCCA
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003035	RWP-RK_dom	649	696
IPR000270	PB1_dom	864	944

External Links

No external refs found!

AT4G35270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation