AT4G34050 (CCoAOMT1)

Aliases : CCoAOMT1

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Gene families : OG0000545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G34050

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00228690	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.03	OrthoFinder output from all 47 species
AMTR_s00046p00069700	CCoAOMT1,...	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.02	OrthoFinder output from all 47 species
AMTR_s02018p00009260	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT1G67990	TSM1, ATTSM1	S-adenosyl-L-methionine-dependent methyltransferases...	0.06	OrthoFinder output from all 47 species
Adi_g014459	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Adi_g117038	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aev_g19780	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aev_g28107	CCOAMT	EC_2.1 transferase transferring one-carbon group &...	0.06	OrthoFinder output from all 47 species
Ala_g25628	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Als_g09926	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Als_g59073	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene04490.t1	CCoAOMT1, Aspi01Gene04490	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene06453.t1	CCoAOMT1, Aspi01Gene06453	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Cba_g04380	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Cba_g69967	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.06	OrthoFinder output from all 47 species
Ceric.20G047900.1	CCoAOMT1, Ceric.20G047900	EC_2.1 transferase transferring one-carbon group &...	0.08	OrthoFinder output from all 47 species
Ceric.35G070100.1	CCoAOMT1, Ceric.35G070100	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Dcu_g08637	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.11	OrthoFinder output from all 47 species
Dcu_g14743	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
GSVIVT01010466001	CCOAMT	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.03	OrthoFinder output from all 47 species
GSVIVT01015244001	No alias	Enzyme classification.EC_2 transferases.EC_2.1...	0.04	OrthoFinder output from all 47 species
GSVIVT01015246001	No alias	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.05	OrthoFinder output from all 47 species
GSVIVT01022100001	CCoAOMT1	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.03	OrthoFinder output from all 47 species
GSVIVT01031715001	CCoAOMT1	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.23	OrthoFinder output from all 47 species
Gb_12670	No alias	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.04	OrthoFinder output from all 47 species
Gb_23219	CCoAOMT1	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.04	OrthoFinder output from all 47 species
Gb_23220	CCoAOMT1	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.05	OrthoFinder output from all 47 species
LOC_Os06g06980.1	CCoAOMT1, LOC_Os06g06980	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.09	OrthoFinder output from all 47 species
LOC_Os08g38900.1	CCoAOMT1, LOC_Os08g38900	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.13	OrthoFinder output from all 47 species
LOC_Os08g38920.1	CCoAOMT1, LOC_Os08g38920	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.03	OrthoFinder output from all 47 species
LOC_Os09g30360.1	CCoAOMT1, LOC_Os09g30360	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.05	OrthoFinder output from all 47 species
Len_g39056	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Len_g54912	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Lfl_g06891	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.06	OrthoFinder output from all 47 species
Lfl_g11414	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
MA_681896g0010	CCoAOMT1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp7g01830.1	CCoAOMT1	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.03	OrthoFinder output from all 47 species
Msp_g03093	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Ore_g44084	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Pnu_g28650	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006795	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Sam_g23651	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Smo101568	CCoAOMT1	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.02	OrthoFinder output from all 47 species
Smo271191	CCoAOMT1	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.07	OrthoFinder output from all 47 species
Smo405144	CCoAOMT1	Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa	0.03	OrthoFinder output from all 47 species
Smo80209	CCoAOMT1	Cell wall.lignin.monolignol synthesis.caffeoyl-CoA...	0.04	OrthoFinder output from all 47 species
Solyc01g107910.4.1	CCoAOMT1, Solyc01g107910	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.06	OrthoFinder output from all 47 species
Solyc02g093230.4.1	CCoAOMT1, Solyc02g093230	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.03	OrthoFinder output from all 47 species
Solyc02g093270.4.1	CCoAOMT1, Solyc02g093270	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.04	OrthoFinder output from all 47 species
Solyc03g032220.3.1	Solyc03g032220	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.03	OrthoFinder output from all 47 species
Solyc09g082660.3.1	CCOAMT, Solyc09g082660	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.03	OrthoFinder output from all 47 species
Solyc10g050160.2.1	CCoAOMT1, Solyc10g050160	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.1	OrthoFinder output from all 47 species
Tin_g43456	CCoAOMT1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Zm00001e024348_P001	CCoAOMT1, Zm00001e024348	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.08	OrthoFinder output from all 47 species
Zm00001e030087_P002	CCoAOMT1, Zm00001e030087	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.08	OrthoFinder output from all 47 species
Zm00001e036403_P001	CCoAOMT1, Zm00001e036403	caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	TAS	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006575	cellular modified amino acid metabolic process	None	Extended
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006598	polyamine catabolic process	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008171	O-methyltransferase activity	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009310	amine catabolic process	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009698	phenylpropanoid metabolic process	RCA	Interproscan
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009804	coumarin metabolic process	None	Extended
BP	GO:0009805	coumarin biosynthetic process	IMP	Interproscan
BP	GO:0009805	coumarin biosynthetic process	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	RCA	Interproscan
BP	GO:0042402	cellular biogenic amine catabolic process	None	Extended
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0003846	2-acylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004622	lysophospholipase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010283	pinoresinol reductase activity	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	HCCA
MF	GO:0016405	CoA-ligase activity	IEP	HCCA
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016710	trans-cinnamate 4-monooxygenase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
MF	GO:0046409	p-coumarate 3-hydroxylase activity	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0047172	shikimate O-hydroxycinnamoyltransferase activity	IEP	HCCA
MF	GO:0047205	quinate O-hydroxycinnamoyltransferase activity	IEP	HCCA
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	HCCA
MF	GO:0050737	O-hydroxycinnamoyltransferase activity	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002935	SAM_O-MeTrfase	47	258

External Links

No external refs found!

AT4G34050 (CCoAOMT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation