1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G30780

AT4G30780


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).


Gene families : OG0002542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002542_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00062450 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g020676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G073300.1 Ceric.21G073300 not classified & original description: pacid=50604493... 0.04 OrthoFinder output from all 47 species
Ehy_g06770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29135 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_40861 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp2g19080.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g13543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117680.4.1 Solyc03g117680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036297_P001 Zm00001e036297 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
BP GO:0010962 regulation of glucan biosynthetic process IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0032527 protein exit from endoplasmic reticulum IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0032950 regulation of beta-glucan metabolic process IEP HCCA
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP HCCA
BP GO:0032952 regulation of (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0032953 regulation of (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!