AT4G30440 (GAE1)

Aliases : GAE1

Description : UDP-D-glucuronate 4-epimerase 1

Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G30440
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00257170	GAE6,...	Carbohydrate metabolism.nucleotide sugar...	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00132110	GAE1,...	Carbohydrate metabolism.nucleotide sugar...	0.04	OrthoFinder output from all 47 species
AT1G02000	GAE2	UDP-D-glucuronate 4-epimerase 2	0.06	OrthoFinder output from all 47 species
AT2G45310	GAE4	UDP-D-glucuronate 4-epimerase 4	0.05	OrthoFinder output from all 47 species
Ala_g05460	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g37564	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g25090	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.06G059900.1	GAE2, Ceric.06G059900	UDP-D-glucuronic acid 4-epimerase & original...	0.03	OrthoFinder output from all 47 species
Dac_g33060	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os08g41440.1	GAE6, LOC_Os08g41440	UDP-D-glucuronic acid 4-epimerase	0.04	OrthoFinder output from all 47 species
Lfl_g01600	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g48023	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g07780	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g38572	GAE2	UDP-D-glucuronic acid 4-epimerase & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g09520	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g018260.1.1	GAE3, Solyc10g018260	UDP-D-glucuronic acid 4-epimerase	0.02	OrthoFinder output from all 47 species
Spa_g12682	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g14885	GAE1	UDP-D-glucuronic acid 4-epimerase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e003638_P001	GAE6, Zm00001e003638	UDP-D-glucuronic acid 4-epimerase	0.04	OrthoFinder output from all 47 species
Zm00001e034613_P001	GAE6, Zm00001e034613	UDP-D-glucuronic acid 4-epimerase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016854	racemase and epimerase activity	None	Extended
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050378	UDP-glucuronate 4-epimerase activity	IDA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009646	response to absence of light	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0048571	long-day photoperiodism	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048574	long-day photoperiodism, flowering	IEP	HCCA
BP	GO:0051592	response to calcium ion	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0080164	regulation of nitric oxide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016040	NAD(P)-bd_dom	91	410

External Links

No external refs found!

AT4G30440 (GAE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation