AT4G30250

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G30250
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00111720	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00024p00191310	evm_27.TU.AmTr_v1...	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
AT3G28610	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT5G17760	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
Adi_g054958	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g088333	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g30887	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g06267	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05196	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g23308	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04942	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g06181	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g38981	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30040.t1	Aspi01Gene30040	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene72894.t1	Aspi01Gene72894	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0059.g034525	No alias	not classified & original description: CDS=1-2166	0.04	OrthoFinder output from all 47 species
Azfi_s0349.g066532	No alias	not classified & original description: CDS=1-1605	0.04	OrthoFinder output from all 47 species
Azfi_s0349.g066535	No alias	not classified & original description: CDS=1-1455	0.04	OrthoFinder output from all 47 species
Cba_g33812	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.06G084000.1	Ceric.06G084000	not classified & original description: pacid=50619247...	0.04	OrthoFinder output from all 47 species
Ceric.19G071300.1	Ceric.19G071300	not classified & original description: pacid=50576608...	0.03	OrthoFinder output from all 47 species
Ceric.37G021100.1	Ceric.37G021100	not classified & original description: pacid=50616007...	0.03	OrthoFinder output from all 47 species
Dcu_g12773	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09734	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10044	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11177	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01008088001	No alias	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01023336001	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os01g40140.1	LOC_Os01g40140	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os03g02330.1	LOC_Os03g02330	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os07g33380.1	LOC_Os07g33380	AAA-ATPase At5g17760 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os09g26260.1	LOC_Os09g26260	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os09g27340.1	LOC_Os09g27340	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os12g28590.1	AATP1, LOC_Os12g28590	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g44190.1	AATP1, LOC_Os12g44190	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Len_g40369	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10435468g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_23842g0010	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_56516g0010	No alias	AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g03762	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g04440	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g09594	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g015060.4.1	Solyc05g015060	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e033043_P001	Zm00001e033043	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e034224_P001	Zm00001e034224	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0007276	gamete generation	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009934	regulation of meristem structural organization	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010338	leaf formation	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019209	kinase activator activity	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0035265	organ growth	IEP	HCCA
BP	GO:0040009	regulation of growth rate	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0042752	regulation of circadian rhythm	IEP	HCCA
BP	GO:0045168	cell-cell signaling involved in cell fate commitment	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0046620	regulation of organ growth	IEP	HCCA
BP	GO:0046622	positive regulation of organ growth	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048639	positive regulation of developmental growth	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	249	391
IPR025753	AAA_N_dom	26	126

External Links

No external refs found!

AT4G30250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation