AT4G30060

Description : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G30060

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00180800	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
Adi_g097183	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g01597	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g76791	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01010878001	No alias	No description available	0.04	OrthoFinder output from all 47 species
Lfl_g07289	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_11883g0010	No alias	no description available(sp\|q65xs5\|bc10_orysj : 160.0)	0.03	OrthoFinder output from all 47 species
Msp_g39137	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g08644	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05761	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g09483	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014285_P001	Zm00001e014285	no description available(sp\|q65xs5\|bc10_orysj : 122.0)	0.03	OrthoFinder output from all 47 species
Zm00001e029160_P001	Zm00001e029160	no description available(sp\|q65xs5\|bc10_orysj : 176.0)	0.03	OrthoFinder output from all 47 species
Zm00001e040053_P001	Zm00001e040053	no description available(sp\|q65xs5\|bc10_orysj : 165.0)	0.03	OrthoFinder output from all 47 species
Zm00001e042023_P001	Zm00001e042023	no description available(sp\|q65xs5\|bc10_orysj : 163.0)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISM	Interproscan
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003882	CDP-diacylglycerol-serine O-phosphatidyltransferase activity	IEP	HCCA
MF	GO:0004448	isocitrate dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004707	MAP kinase activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006102	isocitrate metabolic process	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006658	phosphatidylserine metabolic process	IEP	HCCA
BP	GO:0006659	phosphatidylserine biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
MF	GO:0017169	CDP-alcohol phosphatidyltransferase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030041	actin filament polymerization	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
MF	GO:0031176	endo-1,4-beta-xylanase activity	IEP	HCCA
CC	GO:0031312	extrinsic component of organelle membrane	IEP	HCCA
CC	GO:0031314	extrinsic component of mitochondrial inner membrane	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0048317	seed morphogenesis	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
MF	GO:0097599	xylanase activity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003406	Glyco_trans_14	110	340

External Links

No external refs found!

AT4G30060

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation