AT4G29300 (LCR27)


Aliases : LCR27

Description : low-molecular-weight cysteine-rich 27


Gene families : OG0016014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G29300

Target Alias Description ECC score Gene Family Method Actions
AT2G22121 LCR35 low-molecular-weight cysteine-rich 35 0.06 OrthoFinder output from all 47 species
AT4G09153 LCR36 low-molecular-weight cysteine-rich 36 0.09 OrthoFinder output from all 47 species
AT4G29273 LCR23 low-molecular-weight cysteine-rich 23 0.06 OrthoFinder output from all 47 species
AT4G29280 LCR22 low-molecular-weight cysteine-rich 22 0.09 OrthoFinder output from all 47 species
AT4G29283 LCR21 low-molecular-weight cysteine-rich 21 0.07 OrthoFinder output from all 47 species
AT5G48905 LCR12 low-molecular-weight cysteine-rich 12 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0031351 obsolete integral component of plastid membrane IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR010851 DEFL 26 77
No external refs found!