AT4G29270

Description : HAD superfamily, subfamily IIIB acid phosphatase

Gene families : OG0000371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G29270
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00206560	evm_27.TU.AmTr_v1...	Uncharacterized protein At2g39920 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G04040	No alias	HAD superfamily, subfamily IIIB acid phosphatase	0.05	OrthoFinder output from all 47 species
AT5G24770	VSP2, ATVSP2	vegetative storage protein 2	0.05	OrthoFinder output from all 47 species
AT5G24780	ATVSP1, VSP1	vegetative storage protein 1	0.09	OrthoFinder output from all 47 species
Adi_g049141	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04530	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08898	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g30772	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g01346	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g38824	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene22301.t1	Aspi01Gene22301	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g03938	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g19881	No alias	acid phosphatase storage protein & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01029880001	No alias	Acid phosphatase 1 OS=Solanum lycopersicum	0.07	OrthoFinder output from all 47 species
Gb_13212	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Gb_19054	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Gb_19055	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Gb_19056	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Gb_28927	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
Gb_34529	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.06	OrthoFinder output from all 47 species
LOC_Os05g09724.1	LOC_Os05g09724	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
LOC_Os05g10210.1	LOC_Os05g10210	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
LOC_Os05g10370.1	LOC_Os05g10370	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_10430401g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_10435570g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
MA_174927g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
MA_177384g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_6900320g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.07	OrthoFinder output from all 47 species
MA_82067g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
MA_948726g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Mp2g01450.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
Mp6g14170.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Nbi_g05280	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30142	No alias	acid phosphatase storage protein & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g37420	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43776	No alias	acid phosphatase storage protein & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g09429	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g23500	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g07395	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019920	No alias	acid phosphatase storage protein & original description:...	0.04	OrthoFinder output from all 47 species
Sam_g12959	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g121100.4.1	Solyc03g121100	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc06g062380.3.1	Solyc06g062380	Acid phosphatase 1 OS=Solanum lycopersicum...	0.06	OrthoFinder output from all 47 species
Solyc06g062390.3.1	Solyc06g062390	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Solyc09g090600.3.1	Solyc09g090600	Acid phosphatase 1 OS=Solanum lycopersicum...	0.06	OrthoFinder output from all 47 species
Spa_g51112	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g21417	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001564_P002	Zm00001e001564	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
Zm00001e031215_P001	Zm00001e031215	Stem 28 kDa glycoprotein OS=Glycine max...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003993	acid phosphatase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	HCCA
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0002020	protease binding	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004520	endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006722	triterpenoid metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
CC	GO:0010168	ER body	IEP	HCCA
BP	GO:0010263	tricyclic triterpenoid biosynthetic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010683	tricyclic triterpenoid metabolic process	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015301	obsolete anion:anion antiporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
MF	GO:0015928	fucosidase activity	IEP	HCCA
BP	GO:0016104	triterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
MF	GO:0031559	oxidosqualene cyclase activity	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0045431	flavonol synthase activity	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
MF	GO:0046715	active borate transmembrane transporter activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0051552	flavone metabolic process	IEP	HCCA
BP	GO:0051554	flavonol metabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0051746	thalianol synthase activity	IEP	HCCA
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070417	cellular response to cold	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0080003	thalianol metabolic process	IEP	HCCA
MF	GO:0080004	thalian-diol desaturase activity	IEP	HCCA
MF	GO:0080014	thalianol hydroxylase activity	IEP	HCCA
BP	GO:0080119	ER body organization	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005519	Acid_phosphat_B-like	31	255

External Links

No external refs found!

AT4G29270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation