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  5. AT4G28600

AT4G28600 (NPGR2)


Aliases : NPGR2

Description : no pollen germination related 2


Gene families : OG0002332 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28600

Target Alias Description ECC score Gene Family Method Actions
Als_g05054 NPG1 component *(NPG) of phosphatidylinositol 4-kinase... 0.04 OrthoFinder output from all 47 species
Ehy_g03886 NPG1 component *(NPG) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species
GSVIVT01035578001 NPG1 Protein NPG1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os11g46230.1 NPG1, LOC_Os11g46230 Protein NPG1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g23084 NPG1 component *(NPG) of phosphatidylinositol 4-kinase... 0.03 OrthoFinder output from all 47 species
Lfl_g10427 NPG1 component *(NPG) of phosphatidylinositol 4-kinase... 0.03 OrthoFinder output from all 47 species
Ore_g20098 NPG1 component *(NPG) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding ISS Interproscan
MF GO:0005516 calmodulin binding TAS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010315 auxin export across the plasma membrane IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 629 657
No external refs found!