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  5. AT4G28510

AT4G28510 (PHB1, ATPHB1)


Aliases : PHB1, ATPHB1

Description : prohibitin 1


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28510

Target Alias Description ECC score Gene Family Method Actions
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00373 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50091.t1 PHB1, ATPHB1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g15220 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01027465001 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24064 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os07g15880.1 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_9438062g0010 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp1g10410.1 PHB1, ATPHB1 Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g12045 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07645 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c25_1160V3.1 PHB1, ATPHB1, Pp3c25_1160 prohibitin 6 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022270 PHB1, ATPHB1 not classified & original description: CDS=199-1050 0.03 OrthoFinder output from all 47 species
Sam_g28993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g008140.3.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g21133 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25323 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00443 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009600_P001 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005747 mitochondrial respiratory chain complex I IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1900865 chloroplast RNA modification IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 38 213
No external refs found!