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  5. AT4G28320

AT4G28320 (MAN5, AtMAN5)


Aliases : MAN5, AtMAN5

Description : Glycosyl hydrolase superfamily protein


Gene families : OG0000482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00136900 AtMAN6, MAN6,... Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
Als_g16094 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21043 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07348 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18088 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030165001 AtMAN6, MAN6 Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0009845 seed germination IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005819 spindle IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0090435 protein localization to nuclear envelope IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 80 377
No external refs found!