AT4G27260 (GH3.5, WES1)

Aliases : GH3.5, WES1

Description : Auxin-responsive GH3 family protein

Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G27260

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00208540	DFL1, GH3.6,...	Phytohormones.auxin.conjugation and...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00199760	GH3.9,...	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.02	OrthoFinder output from all 47 species
AT1G28130	GH3.17	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
AT5G13360	No alias	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
AT5G51470	No alias	Auxin-responsive GH3 family protein	0.05	OrthoFinder output from all 47 species
Ala_g24399	GH3.5, WES1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g46633	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene00423.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00424.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00425.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00426.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03301.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene06631.t1	GH3.5, WES1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene33576.t1	DFL1, GH3.6,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.06G002400.1	DFL1, GH3.6,...	not classified & original description: pacid=50620356...	0.1	OrthoFinder output from all 47 species
Ceric.08G060800.1	DFL1, GH3.6,...	not classified & original description: pacid=50637832...	0.1	OrthoFinder output from all 47 species
Ceric.1Z009000.1	DFL1, GH3.6,...	not classified & original description: pacid=50632766...	0.07	OrthoFinder output from all 47 species
Ceric.22G006300.1	GH3.5, WES1,...	not classified & original description: pacid=50614582...	0.07	OrthoFinder output from all 47 species
Ceric.26G006600.1	GH3.5, WES1,...	not classified & original description: pacid=50599333...	0.06	OrthoFinder output from all 47 species
Dac_g30026	GH3.1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g32435	GH3.5, WES1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g32800	GH3.5, WES1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g44438	GH3.1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03008	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Dde_g26531	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.05	OrthoFinder output from all 47 species
Gb_00287	DFL1, GH3.6	Indole-3-acetic acid-amido synthetase GH3.6...	0.09	OrthoFinder output from all 47 species
Gb_04369	No alias	indole-3-acetic acid-amido synthetase	0.02	OrthoFinder output from all 47 species
Gb_06148	GH3.17	Indole-3-acetic acid-amido synthetase GH3.17...	0.06	OrthoFinder output from all 47 species
Gb_07002	GH3.5, WES1	Indole-3-acetic acid-amido synthetase GH3.5...	0.04	OrthoFinder output from all 47 species
Gb_12334	GH3.5, WES1	Indole-3-acetic acid-amido synthetase GH3.5...	0.03	OrthoFinder output from all 47 species
Gb_23805	DFL1, GH3.6	Indole-3-acetic acid-amido synthetase GH3.5...	0.03	OrthoFinder output from all 47 species
Gb_31649	GH3.5, WES1	Indole-3-acetic acid-amido synthetase GH3.5...	0.04	OrthoFinder output from all 47 species
Gb_31650	GH3.5, WES1	Indole-3-acetic acid-amido synthetase GH3.5...	0.02	OrthoFinder output from all 47 species
Gb_36596	GH3.17	Indole-3-acetic acid-amido synthetase GH3.17...	0.03	OrthoFinder output from all 47 species
LOC_Os06g30440.1	GH3.17, LOC_Os06g30440	Probable indole-3-acetic acid-amido synthetase GH3.7...	0.02	OrthoFinder output from all 47 species
LOC_Os11g32510.1	GH3.17, LOC_Os11g32510	Indole-3-acetic acid-amido synthetase GH3.17...	0.07	OrthoFinder output from all 47 species
LOC_Os11g32520.1	GH3.17, LOC_Os11g32520	Probable indole-3-acetic acid-amido synthetase GH3.13...	0.05	OrthoFinder output from all 47 species
MA_100975g0010	DFL1, GH3.6	Indole-3-acetic acid-amido synthetase GH3.6...	0.04	OrthoFinder output from all 47 species
MA_10434772g0010	DFL1, GH3.6	indole-3-acetic acid-amido synthetase	0.02	OrthoFinder output from all 47 species
Msp_g28987	DFL1, GH3.6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g37634	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Msp_g43242	GH3.17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g43816	DFL1, GH3.6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02305	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.05	OrthoFinder output from all 47 species
Ore_g11120	GH3.5, WES1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g65753	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g14022	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g31410	GH3.5, WES1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001444	GH3.5, WES1	not classified & original description: CDS=1-2121	0.04	OrthoFinder output from all 47 species
Solyc02g064810.1.1	GH3.1, Solyc02g064810	Probable indole-3-acetic acid-amido synthetase GH3.1...	0.05	OrthoFinder output from all 47 species
Solyc02g064830.4.1	GH3.1, Solyc02g064830	indole-3-acetic acid-amido synthetase	0.07	OrthoFinder output from all 47 species
Solyc02g092820.4.1	GH3.1, Solyc02g092820	indole-3-acetic acid-amido synthetase	0.07	OrthoFinder output from all 47 species
Spa_g06910	GH3.5, WES1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g53823	GH3.5, WES1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g09110	GH3.5, WES1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e010686_P001	GH3.1, Zm00001e010686	indole-3-acetic acid-amido synthetase	0.07	OrthoFinder output from all 47 species
Zm00001e011159_P002	GH3.17, Zm00001e011159	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	OrthoFinder output from all 47 species
Zm00001e035444_P002	GH3.1, Zm00001e035444	indole-3-acetic acid-amido synthetase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009403	toxin biosynthetic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009700	indole phytoalexin biosynthetic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010120	camalexin biosynthetic process	IMP	Interproscan
BP	GO:0010252	auxin homeostasis	TAS	Interproscan
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IDA	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016881	acid-amino acid ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0042435	indole-containing compound biosynthetic process	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042762	regulation of sulfur metabolic process	None	Extended
BP	GO:0043455	regulation of secondary metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046217	indole phytoalexin metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051176	positive regulation of sulfur metabolic process	None	Extended
BP	GO:0052314	phytoalexin metabolic process	None	Extended
BP	GO:0052315	phytoalexin biosynthetic process	None	Extended
BP	GO:0052317	camalexin metabolic process	None	Extended
BP	GO:0052318	regulation of phytoalexin metabolic process	None	Extended
BP	GO:0052319	regulation of phytoalexin biosynthetic process	None	Extended
BP	GO:0052320	positive regulation of phytoalexin metabolic process	None	Extended
BP	GO:0052322	positive regulation of phytoalexin biosynthetic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	None	Extended
BP	GO:1900378	positive regulation of secondary metabolite biosynthetic process	None	Extended
BP	GO:1901182	regulation of camalexin biosynthetic process	None	Extended
BP	GO:1901183	positive regulation of camalexin biosynthetic process	IMP	Interproscan
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009830	cell wall modification involved in abscission	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0044277	cell wall disassembly	IEP	HCCA
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004993	GH3	28	578

External Links

No external refs found!

AT4G27260 (GH3.5, WES1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation