AT4G25860 (ORP4A)

Aliases : ORP4A

Description : OSBP(oxysterol binding protein)-related protein 4A

Gene families : OG0002118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002118_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G25860

Target	Alias	Description	ECC score	Gene Family Method
AT5G57240	ORP4C	OSBP(oxysterol binding protein)-related protein 4C	0.04	OrthoFinder output from all 47 species
Aspi01Gene45763.t1	ORP4B, Aspi01Gene45763	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g45328	ORP4A	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g30177	ORP4B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo145911	ORP4B	Oxysterol-binding protein-related protein 4B...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005496	steroid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
MF	GO:0008142	oxysterol binding	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	ISS	Interproscan
MF	GO:0008289	lipid binding	None	Extended
MF	GO:0032934	sterol binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003785	actin monomer binding	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010496	intercellular transport	IEP	HCCA
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
CC	GO:0031209	SCAR complex	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0051125	regulation of actin nucleation	IEP	HCCA
BP	GO:0051127	positive regulation of actin nucleation	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	HCCA
CC	GO:0071944	cell periphery	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:2000280	regulation of root development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000648	Oxysterol-bd	38	364

External Links

No external refs found!