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AT4G25680


Description : PPPDE putative thiol peptidase family protein


Gene families : OG0002455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25680

Target Alias Description ECC score Gene Family Method Actions
Aev_g06606 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g01780.1 LOC_Os06g01780 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species
Pnu_g11036 No alias deubiquitinase *(PICI1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005686 U2 snRNP IEP HCCA
CC GO:0015030 Cajal body IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 3 150
No external refs found!