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  5. AT4G23460

AT4G23460


Description : Adaptin family protein


Gene families : OG0001612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23460
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Adi_g058274 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.02 OrthoFinder output from all 47 species
Aev_g01490 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Aev_g02524 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
Ala_g15640 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.1 OrthoFinder output from all 47 species
Ala_g16231 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Als_g46996 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Aob_g09058 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Aop_g14503 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Cba_g31750 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ceric.13G014400.1 Ceric.13G014400 large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Ceric.37G056900.1 Ceric.37G056900 large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.38 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Cre05.g234665 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.09 OrthoFinder output from all 47 species
Cre11.g478156 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Dcu_g01903 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.08 OrthoFinder output from all 47 species
Dcu_g07725 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Dde_g06808 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.14 OrthoFinder output from all 47 species
GSVIVT01035675001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.04 OrthoFinder output from all 47 species
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
LOC_Os01g43630.1 LOC_Os01g43630 large subunit beta of AP-4 vacuole cargo adaptor complex 0.12 OrthoFinder output from all 47 species
LOC_Os03g23950.1 LOC_Os03g23950 large subunit beta of AP-1 trans-Golgi network cargo... 0.15 OrthoFinder output from all 47 species
Len_g12570 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Lfl_g02298 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Lfl_g05633 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.06 OrthoFinder output from all 47 species
MA_10429323g0010 No alias Beta-adaptin-like protein A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Mp6g09050.1 No alias large subunit beta of AP-4 vacuole cargo adaptor complex 0.1 OrthoFinder output from all 47 species
Msp_g00711 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Nbi_g10984 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Nbi_g15154 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.02 OrthoFinder output from all 47 species
Ore_g04993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36319 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Pir_g09755 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
Smo269763 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.07 OrthoFinder output from all 47 species
Solyc08g068210.3.1 Solyc08g068210 large subunit beta of AP-4 vacuole cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Solyc08g081320.3.1 Solyc08g081320 large subunit beta of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Spa_g12477 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e001693_P001 Zm00001e001693 large subunit beta of AP-1 trans-Golgi network cargo... 0.14 OrthoFinder output from all 47 species
Zm00001e020411_P002 Zm00001e020411 large subunit beta of AP-4 vacuole cargo adaptor complex 0.09 OrthoFinder output from all 47 species
Zm00001e027916_P001 Zm00001e027916 large subunit beta of AP-4 vacuole cargo adaptor complex 0.13 OrthoFinder output from all 47 species
Zm00001e038184_P001 Zm00001e038184 large subunit beta of AP-1 trans-Golgi network cargo... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
MF GO:0030276 clathrin binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010235 guard mother cell cytokinesis IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 15 533
IPR015151 B-adaptin_app_sub_C 782 890
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 669 771
No external refs found!