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  5. AT4G21430

AT4G21430 (B160)


Aliases : B160

Description : Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G21430
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Adi_g035475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086368 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038553001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 OrthoFinder output from all 47 species
Len_g02233 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09343 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29418 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.03 OrthoFinder output from all 47 species
Solyc02g079300.3.1 B160, Solyc02g079300 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Zm00001e023535_P001 Zm00001e023535 histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010081 regulation of inflorescence meristem growth IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018345 protein palmitoylation IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0031935 obsolete regulation of chromatin silencing IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 765 860
IPR014977 WRC_dom 8 49
No external refs found!