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  5. AT4G21340

AT4G21340 (B70)


Aliases : B70

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G21340
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00092220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g37882 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09878 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21733 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37245 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46632 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26124 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29621 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016594001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Gb_40387 No alias transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os04g47810.1 LOC_Os04g47810 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g42180.1 LOC_Os05g42180 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g22949 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36610 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g32076 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18964 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51301 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc02g084880.3.1 Solyc02g084880 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc03g031450.3.1 Solyc03g031450 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc04g080710.4.1 Solyc04g080710 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc06g066580.4.1 Solyc06g066580 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g16714 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016395_P001 Zm00001e016395 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0007043 cell-cell junction assembly IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034329 cell junction assembly IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045216 cell-cell junction organization IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048226 Casparian strip IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
MF GO:1990135 flavonoid sulfotransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!