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AT4G20200


Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein


Gene families : OG0010924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20200
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G66020 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G23230 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G29190 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G13300 TPS13, ATTPS13 terpenoid synthase 13 0.04 OrthoFinder output from all 47 species
AT4G15870 ATTS1, TS1 terpene synthase 1 0.04 OrthoFinder output from all 47 species
AT4G20230 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
CC GO:0042995 cell projection IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0060688 regulation of morphogenesis of a branching structure IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000032 regulation of secondary shoot formation IEP HCCA
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 280 546
IPR001906 Terpene_synth_N 84 249
No external refs found!