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  5. AT4G20000

AT4G20000


Description : VQ motif-containing protein


Gene families : OG0000491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00175790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G35830 No alias VQ motif-containing protein 0.04 OrthoFinder output from all 47 species
AT4G39720 No alias VQ motif-containing protein 0.06 OrthoFinder output from all 47 species
Aev_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39162.t1 Aspi01Gene39162 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39163.t1 Aspi01Gene39163 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G036400.1 Ceric.16G036400 not classified & original description: pacid=50589400... 0.03 OrthoFinder output from all 47 species
Dde_g17707 CAMBP25, ATCAMBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37990 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g07690.1 LOC_Os02g07690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g43140.1 LOC_Os07g43140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9255g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g068460.1.1 Solyc02g068460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g043250.1.1 Solyc07g043250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g51416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011002_P001 Zm00001e011002 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013751_P001 Zm00001e013751 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e025135_P001 Zm00001e025135 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e030376_P001 Zm00001e030376 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033973_P001 Zm00001e033973 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 60 84
No external refs found!